| Chulalongkorn University (Thailand) | 1992 (Inter-University AEA since 1992) |
| University of the Philippines, Los Banos (The Philippines) | 1994 (Inter-University AEA since 2014) |
| Gadjah Mada University (Indonesia) | 1995 |
| Fundação Joaquim Nabuco (Brazil) | 1997 |
| Royal University of Phnom Penh(Cambodia) | 1998 (Inter-University AEA since 2010) |
| Korea University, Graduate School of International Studies (Korea) | 1998 (Inter-University AEA since 2006) |
| Tsinghua University, Development Research Academy for the 21st Century (China) | 1998 (Inter-University AEA) |
| Chinese Academy of Social Sciences, Institute of Literature, Institute of Literature of National Minorities (China) | 2000 |
| Universite Jean Moulin-Lyon 3 (France) | 2000 (Inter-University AEA since 2006) |
| University of Dhaka, Faculty of Social Sciences (Bangladesh) | 2010 |
| The Centre for Bhutan Studies (Bhutan) | 2010 |
| University of Ghana, Faculty of Social Studies (Ghana) | 2010 |
| University of Ottawa, School of International Development and Global Studies (Canada) | 2011 (Inter-University AEA since 2016) |
| Human Sciences Research Council (South Africa) | 2014 |
| Thammasat University , Faculty of Economics (Thailand) | 2014 |
| University of Sri Jayewardenepura , Faculty of Humanities and Social Sciences(Sri Lanka) | 2015 |
| Chiang Mai University ,Faculty of Economics (Thailand) | 2015 |
| Syiah Kuala University, Faculty of Agriculture (Indonesia) | 2017 (with Graduate School of Environmental Studies) |
| Udayana University, Subak Research Center and Centre of Excellence in Tourism (Indonesia) | 2019 |
| The Hungarian Diplomatic Academy (Hungary) | 2021 |